PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG045060.13
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 640aa    MW: 71476.7 Da    PI: 6.3577
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG045060.13genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.41.3e-23119220199
                        EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                        f+k+lt sd++++g +++ +++aee+      ++++++ ++l+ +d++g  W +++i+r++++r++lt+GW+ Fv++++L +gD ++F   +
  TRIDC2AG045060.13 119 FCKTLTASDTSTHGGFSVLRRHAEEClppldmSQNPPC-QELVAKDLHGTDWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--R 207
                        99*****************************7556666.59************************************************..4 PP

                        SSEE..EEEEE-S CS
                 B3  87 rsefelvvkvfrk 99 
                         +++el+v+v+r+
  TRIDC2AG045060.13 208 GENGELRVGVRRH 220
                        49999******96 PP
2Auxin_resp98.78e-33245330183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsd...ldpvrWpnSkWrsLk 83 
                        a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err+sGt++g+     ++++ W +S W+sLk
  TRIDC2AG045060.13 245 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERRFSGTIIGIGStptVSTSLWADSDWKSLK 330
                        789**************************************************************98622256678********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 640 aa     Download sequence    
LVFSIFVRIC SDALFRELWH ACAGPLITVP RQGERVYYFP QGHMEQLEAS TNQQLDQYLP  60
MFNLPSKILC SVVNVELRTE ADSDEVYAQI MLQPEANQGE LTSLGPEPKE LEKGTIHSFC  120
KTLTASDTST HGGFSVLRRH AEECLPPLDM SQNPPCQELV AKDLHGTDWH FRHIFRGQPR  180
RHLLTTGWSV FVSSKRLVAG DAFIFLRGEN GELRVGVRRH MRQVNNMPSS VISSHSMHLG  240
VLATASHAIS TGTLFSVFYK PRTSQSEFVV SVNKYLEAKK QNISVGMRFK MKFEGDEALE  300
RRFSGTIIGI GSTPTVSTSL WADSDWKSLK VQWDEPSSIL RPDRVSPWEL EPLDAANPQP  360
PQPPLRNKRP RLPASPSVVP ELAPKFGLWK SPAEPSQTLS FSEPQQARGL FTNSRFSSSS  420
NVAFNQFYWP ARESREDSYA GSTNKVTVER KLEPAAGGCR LFGIEIRSAV EETQPVLTVS  480
GDGYDQTAAS VDVDSGELSQ PSNMNNSGAQ AASSERALLE TQSRQVRSCT KVIMTGMAVG  540
RAVDLTKLYG YVDLHRKLEE MFDIQGELCS TLKKWQVVYA DEEDDMMLVG DDPWDEFCNM  600
AKRIYIYTYE EAKQLAPKAA KLSRVNSSHE SATPQSGSDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.40.0ARF family protein