PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG044670.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 208aa    MW: 23887.6 Da    PI: 8.6371
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG044670.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH192.6e-06153173426
                       ---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                       e Cr++++   C++ ++C+FaH+
  TRIDC2AG044670.5 153 EVCRDYLK-KMCNR-ESCRFAHP 173
                       89******.*****.*******9 PP
2zf-CCCH21.25.3e-07183205226
                       -S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                       k e Cr+f r G+C + ++C+F H+
  TRIDC2AG044670.5 183 KVEVCRDFKR-GECTR-PTCRFYHP 205
                       89********.*****.*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
RDSKVTACAD SLRNNCFRGR TCRYYHPPPH IQESLLRSIG LDVPQVKTVC RDFARGRCSR  60
SANECRFLHH SSVQECAIVC QDFLRGRCER ISCRYTHVIA QPMLPPPMRD VPMQMPYPEM  120
VYMPPPPPPL GVPMMAPPLS PPRGFADNKN TVEVCRDYLK KMCNRESCRF AHPDSQTEVA  180
HDKVEVCRDF KRGECTRPTC RFYHPSSS