PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG044670.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 106aa    MW: 12151.2 Da    PI: 8.1213
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG044670.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.49.3e-075171426
                      ---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  4 elCrffartGtCkyGdrCkFaHg 26
                      e Cr++++   C++ ++C+FaH+
  TRIDC2AG044670.2 51 EVCRDYLK-KMCNR-ESCRFAHP 71
                      89******.*****.*******9 PP
2zf-CCCH22.61.9e-0781103226
                       -S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                       k e Cr+f r G+C + ++C+F H+
  TRIDC2AG044670.2  81 KVEVCRDFKR-GECTR-PTCRFYHP 103
                       89********.*****.*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MLPPPMRDVP MQMPYPEMVY MPPPPPPLGV PMMAPPLSPP RGFADNKNTV EVCRDYLKKM  60
CNRESCRFAH PDSQTEVAHD KVEVCRDFKR GECTRPTCRF YHPSSS