PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG044350.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ZF-HD | ||||||||
Protein Properties | Length: 341aa MW: 36339.7 Da PI: 7.82 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 88.8 | 5.4e-28 | 70 | 118 | 3 | 56 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56 +++YkeC++NhAa++Gg+a+DGCgE+mp+ ++++lkCaACgCHR+FHRr TRIDC2AG044350.3 70 GAKYKECMRNHAAAMGGQAFDGCGEYMPA-----SPDSLKCAACGCHRSFHRRA 118 579*************************9.....799***************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
PLLRKRYAFL SFFWRGSERE WPRASGWVSE RAREWWWWWD GSELSSRADM MDHLSLVPYE 60 GGSGAGGDAG AKYKECMRNH AAAMGGQAFD GCGEYMPASP DSLKCAACGC HRSFHRRAGS 120 LAGGACPAPF FFSPPPPPPP HHHPPPHHPV LQGFLPSAPP RPPQLALPYH AVPAAWHHAL 180 LDPARAGSET PPRADDCSPG CGSGSFSRKR HRTKFTPEQK ERMRAFAEKQ GWRINRDDGG 240 ALERFCLEIG VKRNVLKVWM HNHKHQLASP TSVAAGMGMG MGMGIGINPG ALGTGTGTGA 300 DAGVGVGGGV GAGTGDGDGD DDDTDDDSPP RAAVSSPSPS P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69600.1 | 5e-43 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG044350.3 |