PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG043070.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 362aa    MW: 40112.3 Da    PI: 5.1056
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG043070.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP80.12e-2583148171
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       r e+sL+ lt+kf++ll+++e+gi++ln+va+ L    v  k+RRiYDi+NVLe+++l+ekk kn+irw+g
  TRIDC2AG043070.4  83 RAEHSLGELTKKFISLLKQAEDGILDLNHVAEIL---VV--KKRRIYDITNVLEGIGLLEKKLKNRIRWRG 148
                       6799******************************...88..9***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
GIVIRMPLKR KAPCGESDAI ESTEWMITSP GFTEGVSSPH MTPVSGKAAR TYKSKAKGSK  60
DGLQTPISNA GSPGTPLTPG SSRAEHSLGE LTKKFISLLK QAEDGILDLN HVAEILVVKK  120
RRIYDITNVL EGIGLLEKKL KNRIRWRGLD DSGANLDNEI SVLETELENL KLQEKALDNR  180
ISEMHEKVRE LTEEENNQRW LYLTEDDIKG LPCFQNETLI AIKAPHGTTL EVPDPDEAGD  240
YVQRRYTIVI RSTMGSIDLY LVSKFEENME ELVGVTTPPR HANVAEPAST DGFIATEAGQ  300
SSRSKDKLPN IQHIHKTPDL NAQNFGGMAK ITPEFDVDAD YYLLTDGDAS SITDMWRTAR  360
IL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36010.11e-102E2F/DP family protein