PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG042230.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 287aa MW: 32068.9 Da PI: 10.1826

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG042230.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	56.1	9.4e-18	56	143	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt+ + L++a+ ++ e+l+rg+l++ +We+v++++ + +s +qCk+k++nl+kryk + ++ + s s s +p+++q+e TRIDC2AG042230.2 56 EWTDGAISSLLDAYMDRFEQLNRGNLRGRDWEDVAAAVtdgqGKSSGGKSVEQCKNKIDNLKKRYKVECQRIAG--SASASLWPWYKQME 143 5***********************************6655344446899***********88888877..467779*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
GNHSSDRGKA SHHTKRRRDR PEEFSDGGEY CSYISGGGRK GRGGGVSSDY RKDREEWTDG 60 AISSLLDAYM DRFEQLNRGN LRGRDWEDVA AAVTDGQGKS SGGKSVEQCK NKIDNLKKRY 120 KVECQRIAGS ASASLWPWYK QMEQIMGNSP SPGTPKPPPA TNDDKPRQQQ QHSNRRYPSS 180 GTGHATTMVP YSRSTPLSNP KWKRVLLKIG GTALAGEAPH NVDPKVIMLI AREVQVAYRH 240 GVEVNRTHSF YYSRLPFCKY QAIQAKLILH FVQSGGYSHG RSECILR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	36	45	GGGRKGRGGG
2	37	46	GGGRKGRGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.2	2e-60	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG042230.2