PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG042230.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 485aa MW: 52198.7 Da PI: 8.7564

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG042230.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	54.9	2.4e-17	99	186	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt+ + L++a+ ++ e+l+rg+l++ +We+v++++ + +s +qCk+k++nl+kryk + ++ + s s s +p+++q+e TRIDC2AG042230.1 99 EWTDGAISSLLDAYMDRFEQLNRGNLRGRDWEDVAAAVtdgqGKSSGGKSVEQCKNKIDNLKKRYKVECQRIAG--SASASLWPWYKQME 186 5***********************************6655344446899***********88888777..467779*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
AHPAPQPSAQ PAPPQQAQGF CLVEASAAGS GAGPGPFAPA REEGNHSSDR GKASHHTKRR 60 RDRPEEFSDG GEYCSYISGG GRKGRGGGVS SDYRKDREEW TDGAISSLLD AYMDRFEQLN 120 RGNLRGRDWE DVAAAVTDGQ GKSSGGKSVE QCKNKIDNLK KRYKVECQRI AGSASASLWP 180 WYKQMEQIMG NSPSPGTPKP PPATNDDKPR QQQQHSNRRY PSSGTGHATT MVPYSRSTPL 240 SNPKWKRVLL KIGGTALAGE APHNVDPKVI MLIAREVQVA YRHGVEVAIL MGGRNVFCAD 300 SWVAATGTDR ASTHPIGMMA AVMNAVLLQA SLEKIGVETR VQTALMMQEV AEPYIRRRAI 360 RHLEKGRVVI FGGTGAGTGN PLFTTDTAAA LRASEINADV VLKGVIGDDE YGCPPRSNGS 420 APFEHISFRE LAARGTSKMD MTAITCCEEN NIPVVIFNML EPGNMSRAIC GDQVGTLVDQ 480 SGRIT

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

AHPAPQPSAQ PAPPQQAQGF CLVEASAAGS GAGPGPFAPA REEGNHSSDR GKASHHTKRR  60
RDRPEEFSDG GEYCSYISGG GRKGRGGGVS SDYRKDREEW TDGAISSLLD AYMDRFEQLN  120
RGNLRGRDWE DVAAAVTDGQ GKSSGGKSVE QCKNKIDNLK KRYKVECQRI AGSASASLWP  180
WYKQMEQIMG NSPSPGTPKP PPATNDDKPR QQQQHSNRRY PSSGTGHATT MVPYSRSTPL  240
SNPKWKRVLL KIGGTALAGE APHNVDPKVI MLIAREVQVA YRHGVEVAIL MGGRNVFCAD  300
SWVAATGTDR ASTHPIGMMA AVMNAVLLQA SLEKIGVETR VQTALMMQEV AEPYIRRRAI  360
RHLEKGRVVI FGGTGAGTGN PLFTTDTAAA LRASEINADV VLKGVIGDDE YGCPPRSNGS  420
APFEHISFRE LAARGTSKMD MTAITCCEEN NIPVVIFNML EPGNMSRAIC GDQVGTLVDQ  480
SGRIT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	79	88	GGGRKGRGGG
2	80	89	GGGRKGRGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	1e-152	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG042230.1