PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG041660.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 234aa MW: 24804.8 Da PI: 7.1472 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 84.9 | 9.8e-27 | 22 | 110 | 1 | 82 |
trihelix 1 rWtkqevlaLiearremeerlr.rgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 rWt+qe+l+Lie++r +e r r rg+ ++ ++W++v++++r++g+er+p+qC+++w+nl+++ykki+e+e++ s + ++++ f TRIDC2AG041660.3 22 RWTRQEILVLIEGKRVVEVRGRgRGRgaaggaaAEPTKWAAVAEYCRRHGVERGPVQCRKRWSNLAGDYKKIREWERSLPSLAGKEVS-F 110 8*****************99995332345555599******************************************98766665443.3 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MSSAGDPGGG IAGPGRAARL PRWTRQEILV LIEGKRVVEV RGRGRGRGAA GGAAAEPTKW 60 AAVAEYCRRH GVERGPVQCR KRWSNLAGDY KKIREWERSL PSLAGKEVSF WAMRNDARRE 120 RRLPGFFDRE VYDIIEGRGS GGGGIRDSGS NAAAVLAEVG EEEGKEKVVF DSGRASVAGD 180 DGLFSSSSSS EEEDEETSTP APAPAPVLPA APYPPPSLAV AVPVPVPVEP LVCC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 2e-35 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG041660.3 |