PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG041660.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 301aa    MW: 32391.9 Da    PI: 10.4843
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG041660.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix84.21.7e-2627115182
          trihelix   1 rWtkqevlaLiearremeerlr.rgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 
                       rWt+qe+l+Lie++r +e r r rg+       ++ ++W++v++++r++g+er+p+qC+++w+nl+++ykki+e+e++  s + ++++ f
  TRIDC2AG041660.2  27 RWTRQEILVLIEGKRVVEVRGRgRGRgaaggaaAEPTKWAAVAEYCRRHGVERGPVQCRKRWSNLAGDYKKIREWERSLPSLAGKEVS-F 115
                       8*****************99995332345555599******************************************98766665443.3 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
RARCGMSSAG DPGGGIAGPG RAARLPRWTR QEILVLIEGK RVVEVRGRGR GRGAAGGAAA  60
EPTKWAAVAE YCRRHGVERG PVQCRKRWSN LAGDYKKIRE WERSLPSLAG KEVSFWAMRN  120
DARRERRLPG FFDREVYDII EGRGSGGGGI RDSGSNAAAV LAEVGEEEGK EKVVFDSGRA  180
SVAGDDGLFS SSSSSEEEDE ETSTPAPAPA PVLPAAPYPP PSLAVAVPVP VPGERAAPFL  240
LFLLLVVLVA EKKTEGHPKA SNKKKLELPM SRHHRRVGRR GSAAMMPQEK PLTCRASLLR  300
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.12e-35Trihelix family protein