PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG041070.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 1062aa MW: 117879 Da PI: 5.5629

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG041070.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	170.1	3.4e-53	80	195	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 +e k+rwlk++e++ iL n+e+ ++t+e+ ++p+sg+l+Lynr++ r+frkDGy w++kkdg+tv E+he+LKvg++++l+cyYah+e+np f TRIDC2AG041070.5 80 REaKSRWLKPSEVYYILLNHEQLQITHEPLNKPPSGALFLYNRRVNRFFRKDGYAWRRKKDGRTVGEAHERLKVGNIDALSCYYAHGEQNPYF 172 4559*************************************************************************************** PP CG-1 95 qrrcywlLeeelekivlvhylev 117 qrrc+w+Le ++++ivlv+y+ev TRIDC2AG041070.5 173 QRRCFWMLEPAYDHIVLVQYREV 195 *******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1062 aa Download sequence
ALFWERTLGA VLPPHPSPST SSISAFTHLP AYCFSSCLFG VGASISWSSR PTPSFHESFE 60 AAGSPQVTMS QSFDINVLLR EAKSRWLKPS EVYYILLNHE QLQITHEPLN KPPSGALFLY 120 NRRVNRFFRK DGYAWRRKKD GRTVGEAHER LKVGNIDALS CYYAHGEQNP YFQRRCFWML 180 EPAYDHIVLV QYREVAEGRY YSTLSNGSAG SLSTLSYPND IHGKHGSTSD FSEGNESHQS 240 SVTEVSSYSA NKEYNHDSGV LLSIPELQQS TVMGMPELDQ SSLERSSEFC MVNNNDSTNT 300 SGLNQALKSI AEQLSLGDDD YIYINQARSL DFTTNTEAAD VQGNQTSNSL GDDEANQIRP 360 EGAHGVGRGI SSSWENVLQS DLGLPASSTY QFGAHYQQSS EYQPPGGLDG SNLQLQISAA 420 KRFLLGSEDP IDSPSYNFIP RDEGINGINT LSAHDSSLES CLNPDWQRTT PVTLQSSSYQ 480 SNSCGYEISE FFDNGQFEPS SEEDTRLALK QKQQFSIREI SPEWAFCYEI TKVIITGDFL 540 CDPSNICWAV MFGDTEVPVE IVQPGVLRCH TPLHSAGKLT LCITTGNRKV CSEIKDFEFR 600 AKSTASSFTD FAPSSMKSTE ELSLLAKFAR ILLCDNGSSA ASGCENPLSR VDWIMEELLK 660 SKLQQWLSLR LQGDDGTCSL SKNEQGIIHL ISALGYDWAL SSVLSAGVGI NLRDSNGWTA 720 LHWAAYYGRE KMVAALLAAG ASAPAVTDPT AQDPVGKSAA FLASERGHVG LAGYLSEVAL 780 TSYLASLTIE ESGISEGLAA IKAERAVESI SQRSAQLHGG TEDELSLKDS LAAVRNAAQA 840 AARIQNAFRA FSFRRRQHKD ARLKDEYGMT QEDIDELAAA SRLYYQHHVS NGQFCDKAAV 900 SIQKKYRGWK GRKNFLQMRR NVVKIQAHVR GHQVRKKYKT FVSTVSVLEK VILRWRRKGH 960 GLRGFRAEQS VMIEAEEGEE EDDDDFEDDE AVKIFRRQKV DESVKESVSR VLSMVDSPEA 1020 RMQYRRMLEE FRQATAELGA SDKATSSILD NDLLVEINKF TC

Sequence ? help Back to Top

Protein Sequence Length: 1062 aa Download sequence

ALFWERTLGA VLPPHPSPST SSISAFTHLP AYCFSSCLFG VGASISWSSR PTPSFHESFE  60
AAGSPQVTMS QSFDINVLLR EAKSRWLKPS EVYYILLNHE QLQITHEPLN KPPSGALFLY  120
NRRVNRFFRK DGYAWRRKKD GRTVGEAHER LKVGNIDALS CYYAHGEQNP YFQRRCFWML  180
EPAYDHIVLV QYREVAEGRY YSTLSNGSAG SLSTLSYPND IHGKHGSTSD FSEGNESHQS  240
SVTEVSSYSA NKEYNHDSGV LLSIPELQQS TVMGMPELDQ SSLERSSEFC MVNNNDSTNT  300
SGLNQALKSI AEQLSLGDDD YIYINQARSL DFTTNTEAAD VQGNQTSNSL GDDEANQIRP  360
EGAHGVGRGI SSSWENVLQS DLGLPASSTY QFGAHYQQSS EYQPPGGLDG SNLQLQISAA  420
KRFLLGSEDP IDSPSYNFIP RDEGINGINT LSAHDSSLES CLNPDWQRTT PVTLQSSSYQ  480
SNSCGYEISE FFDNGQFEPS SEEDTRLALK QKQQFSIREI SPEWAFCYEI TKVIITGDFL  540
CDPSNICWAV MFGDTEVPVE IVQPGVLRCH TPLHSAGKLT LCITTGNRKV CSEIKDFEFR  600
AKSTASSFTD FAPSSMKSTE ELSLLAKFAR ILLCDNGSSA ASGCENPLSR VDWIMEELLK  660
SKLQQWLSLR LQGDDGTCSL SKNEQGIIHL ISALGYDWAL SSVLSAGVGI NLRDSNGWTA  720
LHWAAYYGRE KMVAALLAAG ASAPAVTDPT AQDPVGKSAA FLASERGHVG LAGYLSEVAL  780
TSYLASLTIE ESGISEGLAA IKAERAVESI SQRSAQLHGG TEDELSLKDS LAAVRNAAQA  840
AARIQNAFRA FSFRRRQHKD ARLKDEYGMT QEDIDELAAA SRLYYQHHVS NGQFCDKAAV  900
SIQKKYRGWK GRKNFLQMRR NVVKIQAHVR GHQVRKKYKT FVSTVSVLEK VILRWRRKGH  960
GLRGFRAEQS VMIEAEEGEE EDDDDFEDDE AVKIFRRQKV DESVKESVSR VLSMVDSPEA  1020
RMQYRRMLEE FRQATAELGA SDKATSSILD NDLLVEINKF TC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-141	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG041070.5