PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG038290.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 456aa MW: 48759.2 Da PI: 8.9223

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG038290.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	52.3	1.4e-16	118	177	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a+++a++k++g TRIDC2AG038290.3 118 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDQAALKYWG 177 78*****************988886678446***********************98 PP
2	AP2	52.3	1.5e-16	222	271	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I +s +k +lg+fgt eeAa+a++ a+ k++g TRIDC2AG038290.3 222 YRGVTRHHQHGRWQARIGRVSG---NKDLYLGTFGTQEEAAEAYDIAAIKFRG 271 9*************999754...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
YDVYGGPATA SVLAADEDAA AATAMANWVQ VARGATAYAT AENVLSAAAD RQQHLHHHPL 60 ALSMSSAGSL SSCVTAGAEY GGVVATVDGG RKRGGATAGQ KQPVHHRKSI DTFGQRTSQY 120 RGVTRHRWTG RYEAHLWDNS CKKEGQTRKG RQVYLGGYDM EEKAARAYDQ AALKYWGPST 180 HINFPLEDYQ QELEEMKNMT RQEYVAHLRR KSSGFSRGAS MYRGVTRHHQ HGRWQARIGR 240 VSGNKDLYLG TFGTQEEAAE AYDIAAIKFR GLNAVTNFDI TRYDVDKIMA SNTLLPGELA 300 RRNKDANAAP LPLPAPDDCA ASALVPVSTP GTDTGGSGQH RNQDVMSSGE AFSALHDLVT 360 VDGHTAQGGN GARVHMSMSG ASSLVTSLSN SREESPDRGG GLSMLFAKPP QQPATTTAAS 420 PKLMSTLAPL GSWASSARPA AVSIAHMPIF AAWSDA

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

YDVYGGPATA SVLAADEDAA AATAMANWVQ VARGATAYAT AENVLSAAAD RQQHLHHHPL  60
ALSMSSAGSL SSCVTAGAEY GGVVATVDGG RKRGGATAGQ KQPVHHRKSI DTFGQRTSQY  120
RGVTRHRWTG RYEAHLWDNS CKKEGQTRKG RQVYLGGYDM EEKAARAYDQ AALKYWGPST  180
HINFPLEDYQ QELEEMKNMT RQEYVAHLRR KSSGFSRGAS MYRGVTRHHQ HGRWQARIGR  240
VSGNKDLYLG TFGTQEEAAE AYDIAAIKFR GLNAVTNFDI TRYDVDKIMA SNTLLPGELA  300
RRNKDANAAP LPLPAPDDCA ASALVPVSTP GTDTGGSGQH RNQDVMSSGE AFSALHDLVT  360
VDGHTAQGGN GARVHMSMSG ASSLVTSLSN SREESPDRGG GLSMLFAKPP QQPATTTAAS  420
PKLMSTLAPL GSWASSARPA AVSIAHMPIF AAWSDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-130	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG038290.3