PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG038290.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 402aa MW: 43366.6 Da PI: 8.6691

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG038290.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	40.5	6.7e-13	261	317	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +e+Aa+a+++a++k++g TRIDC2AG038290.2 261 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEEKAARAYDQAALKYWG 317 78*****************77776664346655.77****************98 PP
2	AP2	28.3	4.3e-09	362	394	3	38
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt 38 y+GV+++++ grW A+I +s +k +lg+fgt TRIDC2AG038290.2 362 YRGVTRHHQHGRWQARIGRVSG---NKDLYLGTFGT 394 9*************999754...5*******9 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
NNNGNGNGGS NAAASGWLGF SLSPHMDEHN HVQQQQQQHQ GLFYPSSVAA AYSLGSDVAT 60 GGYYSQLASM PLKSDGSLCI MEALRRTDQQ DHHGPKLEDF LGAGQPAMAL SLDNTSNFYY 120 YSGGGGAGGQ HGQSHGGGFL QQAYDVYGGP ATASVLAADE DAAAATAMAN WVQVARGATA 180 YATAENVLSA AADRQQHLHH HPLALSMSSA GSLSSCVTAG AEYGGVVATV DGGRKRGGAT 240 AGQKQPVHHR KSIDTFGQRT SQYRGVTRHR WTGRYEAHLW DNSCKKEGQT RKGRQGGYDM 300 EEKAARAYDQ AALKYWGPST HINFPLEDYQ QELEEMKNMT RQEYVAHLRR KSSGFSRGAS 360 MYRGVTRHHQ HGRWQARIGR VSGNKDLYLG TFGTSQPLSL DP

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

NNNGNGNGGS NAAASGWLGF SLSPHMDEHN HVQQQQQQHQ GLFYPSSVAA AYSLGSDVAT  60
GGYYSQLASM PLKSDGSLCI MEALRRTDQQ DHHGPKLEDF LGAGQPAMAL SLDNTSNFYY  120
YSGGGGAGGQ HGQSHGGGFL QQAYDVYGGP ATASVLAADE DAAAATAMAN WVQVARGATA  180
YATAENVLSA AADRQQHLHH HPLALSMSSA GSLSSCVTAG AEYGGVVATV DGGRKRGGAT  240
AGQKQPVHHR KSIDTFGQRT SQYRGVTRHR WTGRYEAHLW DNSCKKEGQT RKGRQGGYDM  300
EEKAARAYDQ AALKYWGPST HINFPLEDYQ QELEEMKNMT RQEYVAHLRR KSSGFSRGAS  360
MYRGVTRHHQ HGRWQARIGR VSGNKDLYLG TFGTSQPLSL DP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	3e-94	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG038290.2