PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG038230.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TALE

Protein Properties

Length: 347aa MW: 38522.4 Da PI: 6.5165

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG038230.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30	8.7e-10	273	308	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ TRIDC2AG038230.1 273 YKWPYPSETEKIALAESTGLDQKQINNWFINQRKRH 308 4679*****************************885 PP
2	ELK	37.8	3.9e-13	228	249	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLl+KYsgyL+sL+qEFs TRIDC2AG038230.1 228 ELKYQLLKKYSGYLSSLRQEFS 249 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MDQSSFGNLG AGEGGSSSSK ASSSFLQLQP LSTTTVASGR GPMGGTYYGT PLALHQAAAA 60 AGSSQYQFHH HKSSGEEISQ AEAEAIKAKI MAHPQYTALL VAYLDCQKVG APPDVLERLT 120 AMAAKLDAHP PGRLHEARDP ELDQFMEAYC NMLAKYREEL TRPIEEAMEF LKRVEAQLDS 180 ITGGGHGSAR LSLADGKCEG AGSSEDEMDA SGRENEPPEI DPRAEDKELK YQLLKKYSGY 240 LSSLRQEFSK KKKKGKLPKE ARQKLLHWWE LHYKWPYPSE TEKIALAEST GLDQKQINNW 300 FINQRKRHWK PSEDMPFVMM EGFHPQNAAA LYMDGQFMAD GMYRLGS

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MDQSSFGNLG AGEGGSSSSK ASSSFLQLQP LSTTTVASGR GPMGGTYYGT PLALHQAAAA  60
AGSSQYQFHH HKSSGEEISQ AEAEAIKAKI MAHPQYTALL VAYLDCQKVG APPDVLERLT  120
AMAAKLDAHP PGRLHEARDP ELDQFMEAYC NMLAKYREEL TRPIEEAMEF LKRVEAQLDS  180
ITGGGHGSAR LSLADGKCEG AGSSEDEMDA SGRENEPPEI DPRAEDKELK YQLLKKYSGY  240
LSSLRQEFSK KKKKGKLPKE ARQKLLHWWE LHYKWPYPSE TEKIALAEST GLDQKQINNW  300
FINQRKRHWK PSEDMPFVMM EGFHPQNAAA LYMDGQFMAD GMYRLGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-103	TALE family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG038230.1