PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG035600.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 196aa    MW: 21794 Da    PI: 9.3764
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG035600.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH56.74.3e-184389455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                        hn+ Er+RRdriN+++  L+el+P++      K +Ka+iL +A+eY+ksLq
  TRIDC2AG035600.12 43 VHNQSERKRRDRINEKMKALQELVPHC-----NKSDKASILDEAIEYLKSLQ 89
                       6*************************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
ALLSKRGRDE LGSRREDADD CEAVNETRPQ RPAAKRRTRA AEVHNQSERK RRDRINEKMK  60
ALQELVPHCN KSDKASILDE AIEYLKSLQL QVQIMWMATG MAPMMYPGAH QLMPPMAMGL  120
NSACMPVAQS LSQLQRVAPF MNHHLPNQMP RVQSPAMDSL NVGNNGVCGE PRNPFLHPGN  180
TLTAASQVTT TQLVSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13552KRRTRAAEVHNQSERKRR
24853ERKRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.15e-34bHLH family protein