PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG033700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | YABBY | ||||||||
Protein Properties | Length: 146aa MW: 16424.4 Da PI: 9.4811 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 146.6 | 2.5e-45 | 3 | 124 | 23 | 159 |
YABBY 23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvppv 115 +v+vP+++ +++v vrCGhCt++ls++l ++q+ +a++h ++++ +v +n s++++ ++++ ++++ + +n+++ +p TRIDC2AG033700.1 3 IVNVPNNCYYNIVNVRCGHCTMVLSMDLGPFHQASTAQEH--------QVQN-RVVLNNSGSYDSAARNQR-AMPMYPMVNNQQQVSP----- 80 69************************************98........3444.444455566666666554.5677788888888887..... PP YABBY 116 irPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaakn 159 i+PPekrq vPsaynrfikeeiqrik+snP+ishreafs+aakn TRIDC2AG033700.1 81 IHPPEKRQHVPSAYNRFIKEEIQRIKSSNPEISHREAFSTAAKN 124 89*****************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
CKIVNVPNNC YYNIVNVRCG HCTMVLSMDL GPFHQASTAQ EHQVQNRVVL NNSGSYDSAA 60 RNQRAMPMYP MVNNQQQVSP IHPPEKRQHV PSAYNRFIKE EIQRIKSSNP EISHREAFST 120 AAKNPRGQVC SYADASAGRG RPANYH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 8e-33 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG033700.1 |