PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG032220.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 351aa MW: 39850.8 Da PI: 7.1529

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG032220.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.5	7.1e-21	57	144	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fY +Y+ + GF ++++++++ +g +++tf Csk g+++ ++ +++ ++ t+tgCkak+ vk + +++wev+ leleHnH+l p TRIDC2AG032220.9 57 QFYVTYGCRSGFGITRRSNNTF--DGFRYRSTFICSKGGQSRMRSGV--TRHARKRGTKTGCKAKIIVKDAHfQNRWEVIVLELEHNHPLEP 144 6**************99988..9999*********999877..77777889***********9**************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MEEEGYSTES SNEGDTQEDG DKEKNLAEGD VFKPVHMDPE WIPKVGMVFD SEEDTFQFYV 60 TYGCRSGFGI TRRSNNTFDG FRYRSTFICS KGGQSRMRSG VTRHARKRGT KTGCKAKIIV 120 KDAHFQNRWE VIVLELEHNH PLEPSSIKYK KHLENIPFSL NPPRLSEAPQ SSSLVGYSSS 180 FGDSGIPSSA QIEIKTKIDR NRKLKIAEGD LEALVSFFND MQDRNPCFFH SLDVNEQGQL 240 RNVFWADAKS RSSYNYFGDV VAINVTNFSD QYDIQFMSFV GTNHHAQPLL LGCGLLAGRS 300 LGAYVWLFDT WLRCMNATSP PSIITHYCHD VAIAVKKVFP NSRHPFCLWH I

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MEEEGYSTES SNEGDTQEDG DKEKNLAEGD VFKPVHMDPE WIPKVGMVFD SEEDTFQFYV  60
TYGCRSGFGI TRRSNNTFDG FRYRSTFICS KGGQSRMRSG VTRHARKRGT KTGCKAKIIV  120
KDAHFQNRWE VIVLELEHNH PLEPSSIKYK KHLENIPFSL NPPRLSEAPQ SSSLVGYSSS  180
FGDSGIPSSA QIEIKTKIDR NRKLKIAEGD LEALVSFFND MQDRNPCFFH SLDVNEQGQL  240
RNVFWADAKS RSSYNYFGDV VAINVTNFSD QYDIQFMSFV GTNHHAQPLL LGCGLLAGRS  300
LGAYVWLFDT WLRCMNATSP PSIITHYCHD VAIAVKKVFP NSRHPFCLWH I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	3e-51	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG032220.9