PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG032170.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 908aa    MW: 99768.7 Da    PI: 7.3738
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG032170.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR169.39.3e-22113214190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkek.dgkwevtk 80 
                       +fY++YA ++GF vrks+++k++r++ +t+r fvCsk+g+r+e kk             ++    + + +rtgC a+l++k+    + ++vt+
  TRIDC2AG032170.4 113 EFYKAYAARLGFVVRKSNKSKNSRHT-VTRRLFVCSKQGFRQEPKKPqdetnatdvtvaASPPPPRCPDSRTGCLASLTIKLLPsANAFRVTE 204
                       6*****************99997666.****************99996666666655443344448899*************99899****** PP

              FAR1  81 leleHnHela 90 
                       ++ eHnH+la
  TRIDC2AG032170.4 205 FVAEHNHPLA 214
                       ********97 PP
2FAR169.21e-21260359290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                       fYn+YA++vGFsvr+s++k++  +g i++r fvCs+eg +++ k++                 r   + trtgC+a++++k +   +++v+k+
  TRIDC2AG032170.4 260 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasisanagggaPGPPRPGPPPTRTGCQARMVIKITPCRTYRVAKF 350
                       9*************9976655..9******************99999****999999987778888999************************ PP

              FAR1  82 eleHnHela 90 
                         eHnH+la
  TRIDC2AG032170.4 351 IAEHNHPLA 359
                       *******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 908 aa     Download sequence    
TTHIYPQPPP PQPIHPTSSS SSGCSPPSFL QTLAQTLMST TAHPPASLSG DSSPTTSGSS  60
SPSSSAAVAG SEEPALLGQA TSTSTPSAAG DDAAVPSSPQ MGMYFETEDD AYEFYKAYAA  120
RLGFVVRKSN KSKNSRHTVT RRLFVCSKQG FRQEPKKPQD ETNATDVTVA ASPPPPRCPD  180
SRTGCLASLT IKLLPSANAF RVTEFVAEHN HPLASAVSAV AMIPSSSSHH TIAAAASLPD  240
PRDGPRPEMH FETEDDAYAF YNRYAEHVGF SVRRSYKKRK HGVIVSRIFV CSREGVSDRA  300
KHDGLASISA NAGGGAPGPP RPGPPPTRTG CQARMVIKIT PCRTYRVAKF IAEHNHPLAN  360
SETVHKLRSH KMRARGHELG PGELHRRKQG KGVQLGDAGA ALEYLEGLQV GNPSLYYAVG  420
MAPDGNLAVN FFWADAKSII DFRSFGDVVC FDTTYGLNVY GRPFALFVGV DNHKQLLVLG  480
AALLYDDGIQ SLKWVFQAFD DAMRDRQPKT ILIDERSECA IAAAEVWPGS NHCTSVWHIY  540
HSSKRHLKQV FESSKSFGNA LSQCLFDCED EMEFLSAWEK LIEKHDIGES EWLSRLFLEK  600
EKWALPYRRT VFSADILSTL RKDSMINELK RELNEQEDIL LFFKRYETML EEHRSKKLQA  660
DVDGNQVTLP IPSLRMLKQS SNAYTPEAFK MFQGEFEAYM NCMSFPCSAV GTVSEYKITL  720
DEKPSDAIVK FDALDGLATC SCRKFESVGI QCCHVLKVLD LKNIKELPEQ YILKRWRKDA  780
RSVRMGEEPN CGSSSIMRSS LDVRFSNMCR MVSLIASRAA KSEEAMSYIE SQSSVLLKHL  840
DEILQTSYPE NGNHDVASSS QAISFVGNHP DHTTQARAVA DTANGTDILV GNFCLSSSGQ  900
LKGSVGSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-83FAR1 family protein