PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2AG032100.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | GRF | ||||||||
Protein Properties | Length: 183aa MW: 20024.7 Da PI: 9.223 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 72.1 | 6.4e-23 | 94 | 134 | 1 | 41 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrk 41 ++epgrCrRtDGKkWRC+r++++++k+CErH+hrgr+r + TRIDC2AG032100.3 94 EPEPGRCRRTDGKKWRCWRKTIPNEKYCERHMHRGRKRPVQ 134 69***********************************9765 PP | |||||||
2 | QLQ | 54.9 | 2.6e-19 | 28 | 63 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa+Qlq+L++Q +y+y+aa++PvP +L+++i+k TRIDC2AG032100.3 28 SFTAMQLQELEQQSRVYQYMAARVPVPTHLVFPIWK 63 8*********************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 183 aa Download sequence |
PLHSVATAAL QEEMRALFAS VPEGAGASFT AMQLQELEQQ SRVYQYMAAR VPVPTHLVFP 60 IWKSVTGASS EGAQNYPTLM GLATLCLDFG KSPEPEPGRC RRTDGKKWRC WRKTIPNEKY 120 CERHMHRGRK RPVQVIVEDD EPDSASGSKS SSGKVTEGGK KTDDKSSSSK KLAVAAPAAV 180 EFT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G13960.1 | 4e-31 | GRF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2AG032100.3 |