PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG032100.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 296aa MW: 31781.5 Da PI: 4.748

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG032100.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	71	1.4e-22	207	247	1	41
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrk 41 ++epgrCrRtDGKkWRC+r++++++k+CErH+hrgr+r + TRIDC2AG032100.1 207 EPEPGRCRRTDGKKWRCWRKTIPNEKYCERHMHRGRKRPVQ 247 69***********************************9765 PP
2	QLQ	53.9	5.3e-19	141	176	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa+Qlq+L++Q +y+y+aa++PvP +L+++i+k TRIDC2AG032100.1 141 SFTAMQLQELEQQSRVYQYMAARVPVPTHLVFPIWK 176 8*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
LKAKAPYRRT PPRSNPKDTF CPLLLRGPFA TMAAEGEDKK DANSVGGGGG GGENTLEAAE 60 EAILQAVGQE PGQELEGEVE ESADREGNGD DAGKEDSGCK DLVLVEDPVL VEDPEEAVAT 120 AALQEEMRAL FASVPEGAGA SFTAMQLQEL EQQSRVYQYM AARVPVPTHL VFPIWKSVTG 180 ASSEGAQNYP TLMGLATLCL DFGKSPEPEP GRCRRTDGKK WRCWRKTIPN EKYCERHMHR 240 GRKRPVQVIV EDDEPDSASG SKSSSGKVTE GGKKTDDKSS SSKKLAVAAP AAVEFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-30	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG032100.1