PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG030640.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 342aa    MW: 36501.1 Da    PI: 7.018
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG030640.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.16.2e-162972146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      rg ++++E+  ++d+++ lG++ W+ Ia++++ gRt++++k++w++
  TRIDC2AG030640.2 29 RGTFSEQEERTILDVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 72
                      899*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
LSPRCSGLQR CGKSCRLRWI NYLRPDLKRG TFSEQEERTI LDVHRILGNR WAQIAKHLPG  60
RTDNEVKNFW NSCIKKKLIA QGLDPKTHNL LPASKNLLHA HGATGSSSNS SNNPAAGAQF  120
HSPNGNRNGC ATPLFTISSP TKAIYDAATV APGLYDVHNP GMLMGQHERG HQAALAMQQG  180
YPYVHNNGGG LLLSFRDQTA AGVHASMDFM NGSSNSSSSM EYAAGMPNGN VFNPGVAAFM  240
DETAAMWATV VEPGMGPGIE MAHEHRQQHG LGLEEVVRLG PPPPPLINGG SSGGKGLDMM  300
DVSSEVYGSA GTTAAFDLEL MESCGLFCGA AGNGMEQLQW DC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12720.13e-55MYB family protein