PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG028630.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 261aa MW: 28654.7 Da PI: 6.5232 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.3 | 1.3e-08 | 101 | 148 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE+ RRd++N++f eL +l + + +K +K +iL A++ + +L TRIDC2AG028630.3 101 SKACREKVRRDKLNERFLELGAVLDPG---KTPKIDKCAILNDAIRAVTEL 148 6789**********************9...9**************977665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MASPEGSNWV FDCPLMDDLA AADFAAASTG GFYWTPPMQP QMHTLAQAVS ATPAPNPWYV 60 IAVSPLLSAE INSSVSVDWD HAKGQPKNKR PRSETGAQPS SKACREKVRR DKLNERFLEL 120 GAVLDPGKTP KIDKCAILND AIRAVTELRS EAEKLKDSND SLQEKIRELK AEKNELRDEK 180 QKLKAEKESL EQQIKFMNAR QSLVPHPSVI PAAAFAAAQG QAAGHKLMMP VMSYPGFPMW 240 QFMPPSDVDT SDDPKSCPPV A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 3e-68 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG028630.3 |