PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG026360.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 800aa MW: 91561 Da PI: 7.2222

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG026360.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.2	9.9e-27	17	104	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn YA++vGF vr+s+ ++++n it+rtfvCs+eg+re++k + ++++ +r+etr+gC a+++++++ +gk+++t+++ +HnH+la TRIDC2AG026360.6 17 EFYNIYAEKVGFFVRRSTLWTTSKNI-ITRRTFVCSREGFREKKKGA-KESKCPRPETRIGCPASMTIRLTPNGKYRLTEFVPNHNHQLA 104 6******************97766.************9999.9999**********************************97 PP
2	FAR1	81.8	1.2e-25	146	232	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY+ YA ++GF+vr+++++ + ++ it+r fvCskeg+re+++ + ++ +++r+etrtgC a++++++ ++gk++vt++++ HnH l TRIDC2AG026360.6 146 EFYSMYAGKIGFNVRRASMTIN-AENVITRRMFVCSKEGFREKKRGA-SRVKKPRPETRTGCPACMVIRLASNGKYNVTEFVTFHNHGL 232 6***************9999.5556************9998.99***********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 800 aa Download sequence
MLPEVNMLFD DENDAYEFYN IYAEKVGFFV RRSTLWTTSK NIITRRTFVC SREGFREKKK 60 GAKESKCPRP ETRIGCPASM TIRLTPNGKY RLTEFVPNHN HQLATASTIH MLKAKKIRRK 120 ARAVRENLVD DTVVTPEFEN EDEAYEFYSM YAGKIGFNVR RASMTINAEN VITRRMFVCS 180 KEGFREKKRG ASRVKKPRPE TRTGCPACMV IRLASNGKYN VTEFVTFHNH GLGAAAASDL 240 VMTSLAAGSY QDCGVDLYDE SLDDCYGKQN LIKEDATSNC LEGRSWKRYK CKVPHYGDVG 300 ATLEYLQKMQ HDNPSFFYAV KSDEDGNLTN FLWADSKSIM DFTHFGDVVC LDSGYAVQGY 360 GRPIALFTGL NHHRQTVIFG TALLYDESFE AFRWLFDTFK MAMNSTHPKT LLTDRSAVIS 420 EAVAVSWPET AHRFCVWQIY QNALQQLSQA FHGSRTLEYN FKRCLFDCED EAEFLMAWRE 480 MLENHDLKDN QWLADLLAVK EKWALPYGRE AFYADMKSVQ QKDNLSSELK IYLSLEFDLL 540 SFFVQFEKLL CDRRSAELQL DVSASQSTKK PPSMRILRQA ANVYTPAAYR MFEREFELYM 600 DCMLYNCGEM GTICEYRITV EDNPKDHFVK YDSLNSMSHC SCKRFEFVGI PCRHMLKVLD 660 TRNIKDIPPQ YILKRWRKDA RSGSSNGGYA YSFDGDPQTK RHTLLCRIFS IAAARAATSA 720 ESFAYMESQS SILMGQVEQF LENSPPDIAA IIGANCDRTQ IPVESMITDG LHNHANFING 780 SADDSLTFPF TMGAGTLDYR

Sequence ? help Back to Top

Protein Sequence Length: 800 aa Download sequence

MLPEVNMLFD DENDAYEFYN IYAEKVGFFV RRSTLWTTSK NIITRRTFVC SREGFREKKK  60
GAKESKCPRP ETRIGCPASM TIRLTPNGKY RLTEFVPNHN HQLATASTIH MLKAKKIRRK  120
ARAVRENLVD DTVVTPEFEN EDEAYEFYSM YAGKIGFNVR RASMTINAEN VITRRMFVCS  180
KEGFREKKRG ASRVKKPRPE TRTGCPACMV IRLASNGKYN VTEFVTFHNH GLGAAAASDL  240
VMTSLAAGSY QDCGVDLYDE SLDDCYGKQN LIKEDATSNC LEGRSWKRYK CKVPHYGDVG  300
ATLEYLQKMQ HDNPSFFYAV KSDEDGNLTN FLWADSKSIM DFTHFGDVVC LDSGYAVQGY  360
GRPIALFTGL NHHRQTVIFG TALLYDESFE AFRWLFDTFK MAMNSTHPKT LLTDRSAVIS  420
EAVAVSWPET AHRFCVWQIY QNALQQLSQA FHGSRTLEYN FKRCLFDCED EAEFLMAWRE  480
MLENHDLKDN QWLADLLAVK EKWALPYGRE AFYADMKSVQ QKDNLSSELK IYLSLEFDLL  540
SFFVQFEKLL CDRRSAELQL DVSASQSTKK PPSMRILRQA ANVYTPAAYR MFEREFELYM  600
DCMLYNCGEM GTICEYRITV EDNPKDHFVK YDSLNSMSHC SCKRFEFVGI PCRHMLKVLD  660
TRNIKDIPPQ YILKRWRKDA RSGSSNGGYA YSFDGDPQTK RHTLLCRIFS IAAARAATSA  720
ESFAYMESQS SILMGQVEQF LENSPPDIAA IIGANCDRTQ IPVESMITDG LHNHANFING  780
SADDSLTFPF TMGAGTLDYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-106	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG026360.6