PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG026360.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 895aa MW: 101430 Da PI: 7.3352

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG026360.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85	1.1e-26	111	198	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn YA++vGF vr+s+ ++++n it+rtfvCs+eg+re++k + ++++ +r+etr+gC a+++++++ +gk+++t+++ +HnH+la TRIDC2AG026360.10 111 EFYNIYAEKVGFFVRRSTLWTTSKNI-ITRRTFVCSREGFREKKKGA-KESKCPRPETRIGCPASMTIRLTPNGKYRLTEFVPNHNHQLA 198 6******************97766.************9999.9999**********************************97 PP
2	FAR1	81.6	1.4e-25	240	326	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY+ YA ++GF+vr+++++ + ++ it+r fvCskeg+re+++ + ++ +++r+etrtgC a++++++ ++gk++vt++++ HnH l TRIDC2AG026360.10 240 EFYSMYAGKIGFNVRRASMTIN-AENVITRRMFVCSKEGFREKKRGA-SRVKKPRPETRTGCPACMVIRLASNGKYNVTEFVTFHNHGL 326 6***************9999.5556************9998.99***********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 895 aa Download sequence
MSSNSGGGAK EKGSRIAMPP VPPPLVQNSM PTASDAPTTD LRLAQQSWPG HVVLRPCTSW 60 PPHVNPAYPQ QNGEAVADVV AADVLPVINS CNEKMLPEVN MLFDDENDAY EFYNIYAEKV 120 GFFVRRSTLW TTSKNIITRR TFVCSREGFR EKKKGAKESK CPRPETRIGC PASMTIRLTP 180 NGKYRLTEFV PNHNHQLATA STIHMLKAKK IRRKARAVRE NLVDDTVVTP EFENEDEAYE 240 FYSMYAGKIG FNVRRASMTI NAENVITRRM FVCSKEGFRE KKRGASRVKK PRPETRTGCP 300 ACMVIRLASN GKYNVTEFVT FHNHGLGAAA ASDLVMTSLA AGSYQDCGVD LYDESLDDCY 360 GKQNLIKEDA TSNCLEGRSW KRYKCKVPHY GDVGATLEYL QKMQHDNPSF FYAVKSDEDG 420 NLTNFLWADS KSIMDFTHFG DVVCLDSGYA VQGYGRPIAL FTGLNHHRQT VIFGTALLYD 480 ESFEAFRWLF DTFKMAMNST HPKTLLTDRS AVISEAVAVS WPETAHRFCV WQIYQNALQQ 540 LSQAFHGSRT LEYNFKRCLF DCEDEAEFLM AWREMLENHD LKDNQWLADL LAVKEKWALP 600 YGREAFYADM KSVQQKDNLS SELKIYLSLE FDLLSFFVQF EKLLCDRRSA ELQLDVSASQ 660 STKKPPSMRI LRQAANVYTP AAYRMFEREF ELYMDCMLYN CGEMGTICEY RITVEDNPKD 720 HFVKYDSLNS MSHCSCKRFE FVGIPCRHML KVLDTRNIKD IPPQYILKRW RKDARSGSSN 780 GGYAYSFDGD PQTKRHTLLC RIFSIAAARA ATSAESFAYM ESQSSILMGQ VEQFLENSPP 840 DIAAIIGANC DRTQIPVESM ITDGLHNHAN FINGSADGTC SIKMIPPFLF VATCI

Sequence ? help Back to Top

Protein Sequence Length: 895 aa Download sequence

MSSNSGGGAK EKGSRIAMPP VPPPLVQNSM PTASDAPTTD LRLAQQSWPG HVVLRPCTSW  60
PPHVNPAYPQ QNGEAVADVV AADVLPVINS CNEKMLPEVN MLFDDENDAY EFYNIYAEKV  120
GFFVRRSTLW TTSKNIITRR TFVCSREGFR EKKKGAKESK CPRPETRIGC PASMTIRLTP  180
NGKYRLTEFV PNHNHQLATA STIHMLKAKK IRRKARAVRE NLVDDTVVTP EFENEDEAYE  240
FYSMYAGKIG FNVRRASMTI NAENVITRRM FVCSKEGFRE KKRGASRVKK PRPETRTGCP  300
ACMVIRLASN GKYNVTEFVT FHNHGLGAAA ASDLVMTSLA AGSYQDCGVD LYDESLDDCY  360
GKQNLIKEDA TSNCLEGRSW KRYKCKVPHY GDVGATLEYL QKMQHDNPSF FYAVKSDEDG  420
NLTNFLWADS KSIMDFTHFG DVVCLDSGYA VQGYGRPIAL FTGLNHHRQT VIFGTALLYD  480
ESFEAFRWLF DTFKMAMNST HPKTLLTDRS AVISEAVAVS WPETAHRFCV WQIYQNALQQ  540
LSQAFHGSRT LEYNFKRCLF DCEDEAEFLM AWREMLENHD LKDNQWLADL LAVKEKWALP  600
YGREAFYADM KSVQQKDNLS SELKIYLSLE FDLLSFFVQF EKLLCDRRSA ELQLDVSASQ  660
STKKPPSMRI LRQAANVYTP AAYRMFEREF ELYMDCMLYN CGEMGTICEY RITVEDNPKD  720
HFVKYDSLNS MSHCSCKRFE FVGIPCRHML KVLDTRNIKD IPPQYILKRW RKDARSGSSN  780
GGYAYSFDGD PQTKRHTLLC RIFSIAAARA ATSAESFAYM ESQSSILMGQ VEQFLENSPP  840
DIAAIIGANC DRTQIPVESM ITDGLHNHAN FINGSADGTC SIKMIPPFLF VATCI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-105	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG026360.10