PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG026000.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 196aa    MW: 22082.2 Da    PI: 9.4842
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG026000.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1752.2e-54161441128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l
  TRIDC2AG026000.4  16 LPPGFRFHPTDEELVVHYLKKKAAKVPLPV-TIIAEVDLYKFDPWELPEKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIL 107
                       79****************************.89***************988899*************************************** PP

               NAM  94 sk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++  ++e+vg+kk Lvfy+g+ pkg kt+W+mheyrl
  TRIDC2AG026000.4 108 ASgcGREKVGVKKALVFYRGKPPKGLKTNWIMHEYRL 144
                       *9999999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
RHQPPPPPQQ GSAPDLPPGF RFHPTDEELV VHYLKKKAAK VPLPVTIIAE VDLYKFDPWE  60
LPEKATFGEQ EWYFFSPRDR KYPNGARPNR AATSGYWKAT GTDKPILASG CGREKVGVKK  120
ALVFYRGKPP KGLKTNWIMH EYRLTDASSS ATTSRPPPVT LDDWVLCRIY KKINKAAAGD  180
QQRSMECEDS VEDAVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.13e-88NAC family protein