PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG024960.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 221aa MW: 23767.4 Da PI: 10.4931 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 31.9 | 3.7e-10 | 64 | 105 | 56 | 97 |
DUF260 56 damsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 ++++sl+yeA r+ +Pv+Gavg++++++++l++++++++l+ TRIDC2AG024960.3 64 AVFQSLLYEAAGRTINPVSGAVGLLWAGSWHLCEAAVQTVLR 105 689********************************9998776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
RRQVLRPRRP HVLPHRCPRA AAPRYVRTEG RSMVFFLARR FIGSTIYVDL LWLMFAWCLL 60 WVAAVFQSLL YEAAGRTINP VSGAVGLLWA GSWHLCEAAV QTVLRGGAIR PLPELAGGVP 120 EGGVGGSDLF ASSSRRAVVG CSTYSAAKRV TPRKTWAPEA ASQHQEPPCD LGLFLTPGSA 180 AAAEGERRVR RAGTPSMSSD GSVTTSAGAG EKEPELLNLF V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67420.1 | 4e-21 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG024960.3 |