PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG024930.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 302aa MW: 33030.5 Da PI: 4.5769 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.8 | 2.9e-11 | 226 | 266 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR+riN+++ +L+ l+P+ +K++ +++Le+AveY+k +q TRIDC2AG024930.1 226 RKRRERINERLKTLQNLVPNG-----TKVDISTMLEEAVEYVKFMQ 266 9******************97.....8****************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MESSYSSAMP METDTMSQFL GGDHHCFAYE QQDESMEAMA AMFLPALDTD SNSSSSCLNY 60 EVSPQCWPQP QPQPGHSSSV TSFLDPGHGY ESFEFPVMDP FPHSEFQSHC TDIPYLGGGG 120 EDLSPLDSNC APAAGEEAAN DHIPVTNKRK SRAATTASKK AKKAGKKDFT SNDIEGDDTY 180 VIDPQSSSSC TSEDGDLDGN TKSSSKKTGT RASRGAATDP QSLYARKRRE RINERLKTLQ 240 NLVPNGTKVD ISTMLEEAVE YVKFMQLQIK LLSSDDMWMY APLAYNGINV SSLEMHIAAL 300 QK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27740.1 | 3e-50 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG024930.1 |