PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG024650.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HRT-like
Protein Properties Length: 401aa    MW: 43549.1 Da    PI: 9.5128
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG024650.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like55.87.7e-18155185131
          HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                       +CGv+ledGs C + P +gRKRCe HKG+R+
  TRIDC2AG024650.2 155 VCGVMLEDGSSCLEDPLEGRKRCELHKGRRV 185
                       7*****************************7 PP

2HRT-like291.8e-09316342128
          HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKG 28 
                       iCG+ +++G  Ck  Pv gR RCeeH G
  TRIDC2AG024650.2 316 ICGAVTDNG-YCKLAPVAGRERCEEHRG 342
                       8*******9.6***************98 PP

3HRT-like52.86.5e-17362391130
          HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 
                       +CG++ +dGs+Ck+qP+ gRKRC+ HKG+R
  TRIDC2AG024650.2 362 VCGARASDGSPCKNQPIAGRKRCALHKGQR 391
                       7****************************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    
MGSKKAAEKT EAQLLGVFDY AWNKLQNGAC RREEILLKLE QGSHRLSLLG RVRHLKQRVF  60
GEKAGIKINS TGSVEISSGS MKNMLPRVRT FVGFRPRLVN SGDDLNEAID IHRKCTPQAN  120
TAGNKQAHRR SEGYKVKKVD VIERRTAPIR EAEAVCGVML EDGSSCLEDP LEGRKRCELH  180
KGRRVRVAYS HKVSSSSSTC PVAIPTVESI PQQTANPSKP DQAWQTSADQ SKNLSTNAKE  240
PSLQRSSLEA KEMKIGEAPT EDEAYGTSHA ESQFHQDEPV GRKWFELLKA QKSASAPSLR  300
GQGCQTREAN DNASAICGAV TDNGYCKLAP VAGRERCEEH RGIEVTGASS APCSGRSGWP  360
SVCGARASDG SPCKNQPIAG RKRCALHKGQ RACCASTPSV K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.12e-20HRT-like family protein