PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG024650.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HRT-like | ||||||||
Protein Properties | Length: 401aa MW: 43549.1 Da PI: 9.5128 | ||||||||
Description | HRT-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HRT-like | 55.8 | 7.7e-18 | 155 | 185 | 1 | 31 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 +CGv+ledGs C + P +gRKRCe HKG+R+ TRIDC2AG024650.2 155 VCGVMLEDGSSCLEDPLEGRKRCELHKGRRV 185 7*****************************7 PP | |||||||
2 | HRT-like | 29 | 1.8e-09 | 316 | 342 | 1 | 28 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKG 28 iCG+ +++G Ck Pv gR RCeeH G TRIDC2AG024650.2 316 ICGAVTDNG-YCKLAPVAGRERCEEHRG 342 8*******9.6***************98 PP | |||||||
3 | HRT-like | 52.8 | 6.5e-17 | 362 | 391 | 1 | 30 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 +CG++ +dGs+Ck+qP+ gRKRC+ HKG+R TRIDC2AG024650.2 362 VCGARASDGSPCKNQPIAGRKRCALHKGQR 391 7****************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 401 aa Download sequence |
MGSKKAAEKT EAQLLGVFDY AWNKLQNGAC RREEILLKLE QGSHRLSLLG RVRHLKQRVF 60 GEKAGIKINS TGSVEISSGS MKNMLPRVRT FVGFRPRLVN SGDDLNEAID IHRKCTPQAN 120 TAGNKQAHRR SEGYKVKKVD VIERRTAPIR EAEAVCGVML EDGSSCLEDP LEGRKRCELH 180 KGRRVRVAYS HKVSSSSSTC PVAIPTVESI PQQTANPSKP DQAWQTSADQ SKNLSTNAKE 240 PSLQRSSLEA KEMKIGEAPT EDEAYGTSHA ESQFHQDEPV GRKWFELLKA QKSASAPSLR 300 GQGCQTREAN DNASAICGAV TDNGYCKLAP VAGRERCEEH RGIEVTGASS APCSGRSGWP 360 SVCGARASDG SPCKNQPIAG RKRCALHKGQ RACCASTPSV K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56780.1 | 2e-20 | HRT-like family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG024650.2 |