PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG024300.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 554aa    MW: 61308.4 Da    PI: 6.4709
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG024300.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS434.11e-1321845531373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l+elLl+cA+av+++++ +++ ++ +l++++s +g+p++Rl ay++e+L arla+s++++ykal+++e +   ss+ l+++++++e++P++kf
  TRIDC2AG024300.2 184 LKELLLACARAVEEKNMYAVDVMVPELRKMVSVSGTPLERLGAYMVEGLVARLASSGHSIYKALRCKEPK---SSDLLSYMHFLYEACPYFKF 273
                       5799*****************************************************************9...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       +++ aN aI eav+ge+r+HiiDf i qG+QW++LlqaLa+Rp+gpp++RiTg+++  s   +   l  +g+rL+++A  ++vpfef+  va 
  TRIDC2AG024300.2 274 GYMSANGAIAEAVKGEDRIHIIDFHIAQGAQWISLLQALAARPGGPPTVRITGIDDTVSAyaRGGGLDLVGRRLSHIAGLCKVPFEFHS-VAM 365
                       ********************************************************888899999************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       + e++e  +L + pgEalaVn+ l+lh+++de+vs++++rd++L+lvk+l+P+v+++veqe+++n+++F +rf+e+l+yy+a+f+s++ +lpr
  TRIDC2AG024300.2 366 AGEEVEEAHLGFVPGEALAVNFTLELHHIPDETVSTANHRDRILRLVKGLRPRVLTLVEQESNTNTAPFPQRFAETLDYYAAIFESIDLTLPR 458
                       9******************************************************************************************** PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       +++er+++E+++l+re+vn++acegaer+erhe ++kW++rl++aGF+p pls  +++++++ll+ ++++ y++ e++g+l+lgWk++pLv+ 
  TRIDC2AG024300.2 459 DDRERVNMEQHCLAREVVNLIACEGAERVERHEVFGKWKARLTMAGFRPSPLSALVNATISTLLQSYSEN-YKLAERDGALYLGWKSKPLVVS 550
                       ********************************************************************55.********************** PP

              GRAS 371 SaW 373
                       SaW
  TRIDC2AG024300.2 551 SAW 553
                       *** PP
Sequence ? help Back to Top
Protein Sequence    Length: 554 aa     Download sequence    
MADTPTSRMI HPFSNMQRQN PKQFQFQYSD NPQHPCRPYQ PSPDTHVVPQ HLYSLKSSSD  60
ASYENQVAQM KHTLDSSAAA GCMRHDSPSS HSFTPPSIRS GSGSPSSHDD SRSDSTNGSP  120
VSASCVTVTT EDPNDLKQKL KDLEAEMLGP DAEIVNSLES SVAKQLSLEP EKWAQRMDFP  180
RGDLKELLLA CARAVEEKNM YAVDVMVPEL RKMVSVSGTP LERLGAYMVE GLVARLASSG  240
HSIYKALRCK EPKSSDLLSY MHFLYEACPY FKFGYMSANG AIAEAVKGED RIHIIDFHIA  300
QGAQWISLLQ ALAARPGGPP TVRITGIDDT VSAYARGGGL DLVGRRLSHI AGLCKVPFEF  360
HSVAMAGEEV EEAHLGFVPG EALAVNFTLE LHHIPDETVS TANHRDRILR LVKGLRPRVL  420
TLVEQESNTN TAPFPQRFAE TLDYYAAIFE SIDLTLPRDD RERVNMEQHC LAREVVNLIA  480
CEGAERVERH EVFGKWKARL TMAGFRPSPL SALVNATIST LLQSYSENYK LAERDGALYL  540
GWKSKPLVVS SAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.10.0GRAS family protein