PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG024080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 237aa MW: 25730.7 Da PI: 7.6003 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.7 | 9.8e-19 | 59 | 112 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le F+++r++ + ++ +LA++lgL+ +qV vWFqNrRa++k TRIDC2AG024080.1 59 KKRRLTDEQVHGLELSFREERKLETGRKVHLAAELGLDPKQVAVWFQNRRARHK 112 45689***********************************************99 PP | |||||||
2 | HD-ZIP_I/II | 114.1 | 8.9e-37 | 59 | 148 | 2 | 91 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 kkrrl++eqv+ LE sF+ee+kLe+ rKv+la eLgl+p+qvavWFqnrRAR+k+k +E+++++Lk+a+da ++++Le+e +L+e+l TRIDC2AG024080.1 59 KKRRLTDEQVHGLELSFREERKLETGRKVHLAAELGLDPKQVAVWFQNRRARHKSKLMEEEFAKLKHAHDAAILHKCHLENELLRLKERL 148 9**************************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
SMDKQQVFGS SYVDMPFFAA NGTAQGESRP RARRRRRRAA RCGGGDGDGG DMDGGGDPKK 60 RRLTDEQVHG LELSFREERK LETGRKVHLA AELGLDPKQV AVWFQNRRAR HKSKLMEEEF 120 AKLKHAHDAA ILHKCHLENE LLRLKERLGA TEEEVRRLRS AAGSHGASGN GGDAADAVGA 180 CGGSPSSSFS TGTCQQHPGF SGAGQLGPDD ELMMCVPEYG GYADSSVVEW FSLYGLI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 29 | 38 | RPRARRRRRR |
2 | 33 | 38 | RRRRRR |
3 | 33 | 41 | RRRRRRAAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 1e-29 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG024080.1 |