PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG022240.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 261aa MW: 29486.4 Da PI: 8.9835 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 97.9 | 4.2e-31 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gklyeyss TRIDC2AG022240.5 10 RIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLYEYSS 59 8***********************************************96 PP | |||||||
2 | K-box | 94.7 | 1.5e-31 | 88 | 173 | 13 | 98 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++++ e+ Lk +++ Lq++qR+llGe+L++L+ keLqqLeqqL++slk+iRs+Kn+ll+e+i+elqkkek+l+++n L+k l TRIDC2AG022240.5 88 NQANWGDEYGSLKIKLDALQKSQRQLLGEQLDPLTTKELQQLEQQLDSSLKHIRSRKNQLLFESISELQKKEKSLKDQNGVLQKHL 173 6789******************************************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MGRGPVQLRR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFST KGKLYEYSSQ 60 DSSMDVILER YQRYSFEERA VLDPSIGNQA NWGDEYGSLK IKLDALQKSQ RQLLGEQLDP 120 LTTKELQQLE QQLDSSLKHI RSRKNQLLFE SISELQKKEK SLKDQNGVLQ KHLVETEKEK 180 NNVLSNIHHQ EQLNGATNIH HQEQLNGATT SSPSPTPATA QDSMAPPNIG YLCFHLVHLV 240 ELGRATGDLK GSKFASLVPL Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 8e-68 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG022240.5 |