PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG022240.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 275aa MW: 30925.7 Da PI: 9.7004 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 97.8 | 4.6e-31 | 19 | 68 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gklyeyss TRIDC2AG022240.3 19 RIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLYEYSS 68 8***********************************************96 PP | |||||||
2 | K-box | 94.6 | 1.7e-31 | 96 | 181 | 13 | 98 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++++ e+ Lk +++ Lq++qR+llGe+L++L+ keLqqLeqqL++slk+iRs+Kn+ll+e+i+elqkkek+l+++n L+k l TRIDC2AG022240.3 96 NQANWGDEYGSLKIKLDALQKSQRQLLGEQLDPLTTKELQQLEQQLDSSLKHIRSRKNQLLFESISELQKKEKSLKDQNGVLQKHL 181 6789******************************************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
GRRVGGRPEM GRGPVQLRRI ENKINRQVTF SKRRSGLLKK AHEISVLCDA EVALIVFSTK 60 GKLYEYSSQD SMDVILERYQ RYSFEERAVL DPSIGNQANW GDEYGSLKIK LDALQKSQRQ 120 LLGEQLDPLT TKELQQLEQQ LDSSLKHIRS RKNQLLFESI SELQKKEKSL KDQNGVLQKH 180 LVETEKEKNN VLSNIHHQEQ LNGATNIHHQ EQLNGATTSS PSPTPATAQD SMAPPNIGPY 240 QSRESGGGNP EPQPSPAQAN NSNLPAWMLR TVSNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 8e-68 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG022240.3 |