PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG022240.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 276aa    MW: 31012.8 Da    PI: 9.7004
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG022240.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF97.84.6e-311968251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      rienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gklyeyss
  TRIDC2AG022240.1 19 RIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLYEYSS 68
                      8***********************************************96 PP
2K-box94.61.7e-31971821398
             K-box  13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                       +++++  e+  Lk +++ Lq++qR+llGe+L++L+ keLqqLeqqL++slk+iRs+Kn+ll+e+i+elqkkek+l+++n  L+k l
  TRIDC2AG022240.1  97 NQANWGDEYGSLKIKLDALQKSQRQLLGEQLDPLTTKELQQLEQQLDSSLKHIRSRKNQLLFESISELQKKEKSLKDQNGVLQKHL 182
                       6789******************************************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
GRRVGGRPEM GRGPVQLRRI ENKINRQVTF SKRRSGLLKK AHEISVLCDA EVALIVFSTK  60
GKLYEYSSQD SSMDVILERY QRYSFEERAV LDPSIGNQAN WGDEYGSLKI KLDALQKSQR  120
QLLGEQLDPL TTKELQQLEQ QLDSSLKHIR SRKNQLLFES ISELQKKEKS LKDQNGVLQK  180
HLVETEKEKN NVLSNIHHQE QLNGATNIHH QEQLNGATTS SPSPTPATAQ DSMAPPNIGP  240
YQSRESGGGN PEPQPSPAQA NNSNLPAWML RTVSNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.18e-68MIKC_MADS family protein