PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG021390.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 655aa MW: 75576.9 Da PI: 8.1701

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG021390.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	35.7	1.2e-11	1	24	12	35
GATA 12 WRrgpdgnktLCnaCGlyyrkkgl 35 +Rrgpdg++tLCnaCG+ yrk ++ TRIDC2AG021390.1 1 MRRGPDGPRTLCNACGIAYRKGKM 24 5********************876 PP
2	FAR1	83.9	2.6e-26	58	145	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA +vGFsvrks+s+ks++n ++ rtfvCs+eg+++++k+ +++++r tr+gC a+l +k + + k++vt+++ eHnH+lap TRIDC2AG021390.1 58 EFYNKYAGHVGFSVRKSTSHKSSENI-TKVRTFVCSREGYNRDKKSL--EAKKPRLDTRIGCPARLIIKVTPECKYRVTDFKAEHNHQLAP 145 6*******************6666.899*********9988..99***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MRRGPDGPRT LCNACGIAYR KGKMRRMIEA EPPIDEASLA KLVPEVDMEF ESEEKAYEFY 60 NKYAGHVGFS VRKSTSHKSS ENITKVRTFV CSREGYNRDK KSLEAKKPRL DTRIGCPARL 120 IIKVTPECKY RVTDFKAEHN HQLAPPSTMH MLRSQRILTE LQSGEAELSD DSVVTPTTKA 180 TGDLVVRQVG FLRSISLLPA DYKNYLRSKR TKAMQPGDGG AILKYLQTMQ MDNPSFFYTM 240 QIDEDDKLTN FFWADPKSRE DFTYFNDVLC VDTTYKINGY GRPLALFLGV NHHRQTIIFG 300 AAMLYDESFE SYKWLFESFK IAMHGKEPAV ALIDQSIQLS SAMAAAWPNT AQRVCAWHIY 360 QNSVKHLNQV FQGSKTFAKD FSKCVFGYEE EEEFVFAWRS MLEKYDLRHN EWLSKLFEER 420 ERWALAYDRH IFCADIISSL QAESFSSILK KFLSPQLDLL SFFKHYERAV DEHRYAELQA 480 DFQASQSYPR IPPAKMLKQT SHTYTPVVFE IFRKEFELFM DSVLFTCGEA GTTSDYKVAP 540 SEKPKEHFVR FNSSDNSCMC TCKKFEFMGI SCCHMLKVLD YRNIKELPQI YLLKRWRRTA 600 KSTDEDSQGH AANDNRSSLN VSVPSANHHG LQSINARIQD TSLSNMHENP FHRSS

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MRRGPDGPRT LCNACGIAYR KGKMRRMIEA EPPIDEASLA KLVPEVDMEF ESEEKAYEFY  60
NKYAGHVGFS VRKSTSHKSS ENITKVRTFV CSREGYNRDK KSLEAKKPRL DTRIGCPARL  120
IIKVTPECKY RVTDFKAEHN HQLAPPSTMH MLRSQRILTE LQSGEAELSD DSVVTPTTKA  180
TGDLVVRQVG FLRSISLLPA DYKNYLRSKR TKAMQPGDGG AILKYLQTMQ MDNPSFFYTM  240
QIDEDDKLTN FFWADPKSRE DFTYFNDVLC VDTTYKINGY GRPLALFLGV NHHRQTIIFG  300
AAMLYDESFE SYKWLFESFK IAMHGKEPAV ALIDQSIQLS SAMAAAWPNT AQRVCAWHIY  360
QNSVKHLNQV FQGSKTFAKD FSKCVFGYEE EEEFVFAWRS MLEKYDLRHN EWLSKLFEER  420
ERWALAYDRH IFCADIISSL QAESFSSILK KFLSPQLDLL SFFKHYERAV DEHRYAELQA  480
DFQASQSYPR IPPAKMLKQT SHTYTPVVFE IFRKEFELFM DSVLFTCGEA GTTSDYKVAP  540
SEKPKEHFVR FNSSDNSCMC TCKKFEFMGI SCCHMLKVLD YRNIKELPQI YLLKRWRRTA  600
KSTDEDSQGH AANDNRSSLN VSVPSANHHG LQSINARIQD TSLSNMHENP FHRSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-119	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG021390.1