PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG019230.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 144aa MW: 16193.5 Da PI: 10.3399 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.3 | 6.2e-17 | 34 | 81 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++e+de+l + v+q+G g+W++Ia+ g+ R++k+c++rw yl TRIDC2AG019230.1 34 RGLWSPEDDEKLMNHVAQYGYGCWSSIAKIAGLERCGKSCRLRWMHYL 81 789*****************************************9996 PP | |||||||
2 | Myb_DNA-binding | 41.8 | 2.4e-13 | 87 | 129 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g++++ E++l+++++ G++ W+ Ia+ ++ gRt++++k++w++ TRIDC2AG019230.1 87 GPFSQGEEDLIIHLHSIRGNK-WSQIAAQLP-GRTDNEVKNFWNT 129 799******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence |
SCTAGNAIEL ESASSQSVGG MSKRPGATKK RLKRGLWSPE DDEKLMNHVA QYGYGCWSSI 60 AKIAGLERCG KSCRLRWMHY LTPDRGGPFS QGEEDLIIHL HSIRGNKWSQ IAAQLPGRTD 120 NEVKNFWNTI IKKKLRQRRI DPAI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01680.3 | 6e-58 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG019230.1 |