PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG019220.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 361aa MW: 38168.2 Da PI: 6.5754 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.9 | 4.1e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l + ++++G+g+W+++++ g+ R++k+c++rw +yl TRIDC2AG019220.1 14 RGLWSPEEDEKLMNHIAKYGNGCWSSVPKIAGLERCGKSCRLRWINYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.8 | 1.8e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++++eE++l+++++ lG++ W+ Ia+ ++ gRt++++k++w+++ TRIDC2AG019220.1 67 RGAFSQEEEDLIIHLHSILGNK-WSQIAAQLP-GRTDNEVKNFWNSF 111 89********************.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 361 aa Download sequence |
MSKRPGGTKK RLKRGLWSPE EDEKLMNHIA KYGNGCWSSV PKIAGLERCG KSCRLRWINY 60 LRPDLKRGAF SQEEEDLIIH LHSILGNKWS QIAAQLPGRT DNEVKNFWNS FIKKKLRQRG 120 IDPATHKPLA PAGAAAAATP VSRSAVFSEA ELILSSPVGG PHMPPLVSAE SYVYSRGSMD 180 GAGGVVGGCS DDGSLSSLSG YNNNNQTADF AGYLDADALH GAVIPSVSSS STLNSMAGVS 240 PGGVANGNAT DELCCNNNNK NNPSNSGSGF ESSTTQSSSN HHLPWLELGS ISSCTEDGAG 300 AGAAADHYGA ALDELKWSDY VFDGGYPQYH QQGQCIYGDS KAAADAATAQ FDAHGLGINW 360 C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G57560.1 | 3e-70 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG019220.1 |