PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG018340.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HSF | ||||||||
Protein Properties | Length: 158aa MW: 17980.4 Da PI: 11.8711 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 22.9 | 2.2e-07 | 19 | 96 | 47 | 103 |
T--HHHHHHHHHHTTEEE---SSBTTTT...................X..TTSEEEEESXXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 47 hsnfaSFvRQLnmYgFkkvkdeekksks...................k..ekiweFkhksFkkgkkellekikrkkse 103 h +++ R + g +k +++e+k+ + k + weF+++ F+kg k+ll +i+r+ks+ TRIDC2AG018340.3 19 HVYMSAACRAVRLHGVRKRRERERKKGRrtiwslnttripavragfrKivADRWEFANEFFRKGAKHLLAEIHRRKSS 96 55566667777888888888777775557888888888777776665156999**********************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
ASHQAQRRES IFGCFATRHV YMSAACRAVR LHGVRKRRER ERKKGRRTIW SLNTTRIPAV 60 RAGFRKIVAD RWEFANEFFR KGAKHLLAEI HRRKSSQPPP PSMVPHQAAY HHHYHLGNTF 120 SPPPPPPPAA HHHHHPVYQH FQEEPAAAAT SHGGGNGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G46264.1 | 5e-17 | HSF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG018340.3 |