PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG017880.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 295aa    MW: 34999 Da    PI: 9.2359
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG017880.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.32.7e-084868526
                      --SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                       C  f++ G+C++Gd+C+F+H+
  TRIDC2AG017880.9 48 VCYAFQK-GECSRGDTCRFSHD 68
                      699****.*************7 PP
2zf-CCCH21.15.5e-077698326
                      S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  3 telCrffartGtCkyGdrCkFaHg 26
                      +  C  f++ G+C++ ++C+F+H+
  TRIDC2AG017880.9 76 RGVCYAFQK-GECSRVASCRFSHD 98
                      567******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
ECNRGDACKY SHDEQRNANT GWGSKEDDPK WEHDRHRGPQ NKGESRGVCY AFQKGECSRG  60
DTCRFSHDEQ VAVQGRGVCY AFQKGECSRV ASCRFSHDEQ RNANTDRGSR EDSNARRQHD  120
HDPPKSHKNF PDRTKEEARS GDRDGQSSRS ELYRDRDSRT RYGDRDTKDR DRNMQEKSPE  180
RSRGDRQRGD DRGREDRSDT KDRDRNGHEK SPERSRGDRQ RGDDRGREDR SDVKDRDRNG  240
YEKSPERPRG DRQRGDDRRR EDRSESKRSR HDRDSGVRYE RRGDEEEERY RKSRR