PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG017880.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 297aa    MW: 35184.2 Da    PI: 9.396
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG017880.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.57.6e-062151326
                      S--TTTTT-SS-SS CS
           zf-CCCH 13 GtCkyGdrCkFaHg 26
                      G+C++Gd Ck++H+
  TRIDC2AG017880.6  2 GECNRGDACKYSHD 15
                      9************7 PP
2zf-CCCH25.32.7e-085070526
                      --SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                       C  f++ G+C++Gd+C+F+H+
  TRIDC2AG017880.6 50 VCYAFQK-GECSRGDTCRFSHD 70
                      699****.*************7 PP
3zf-CCCH21.15.6e-0778100326
                       S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   3 telCrffartGtCkyGdrCkFaHg 26 
                       +  C  f++ G+C++ ++C+F+H+
  TRIDC2AG017880.6  78 RGVCYAFQK-GECSRVASCRFSHD 100
                       567******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
KGECNRGDAC KYSHDEQRNA NTGWGSKEDD PKWEHDRHRG PQNKGESRGV CYAFQKGECS  60
RGDTCRFSHD EQVAVQGRGV CYAFQKGECS RVASCRFSHD EQRNANTDRG SREDSNARRQ  120
HDHDPPKSHK NFPDRTKEEA RSGDRDGQSS RSELYRDRDS RTRYGDRDTK DRDRNMQEKS  180
PERSRGDRQR GDDRGREDRS DTKDRDRNGH EKSPERSRGD RQRGDDRGRE DRSDVKDRDR  240
NGYEKSPERP RGDRQRGDDR RREDRSESKR SRHDRDSGVR YERRGDEEEE RYRKSRR