PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG017880.13
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 282aa    MW: 33518.4 Da    PI: 9.8554
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG017880.13genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.32.6e-083454526
                       --SGGGGTS--TTTTT-SS-SS CS
            zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                        C  f++ G+C++Gd+C+F+H+
  TRIDC2AG017880.13 34 VCYAFQK-GECSRGDTCRFSHD 54
                       699****.*************7 PP
2zf-CCCH21.25.2e-076284326
                       S---SGGGGTS--TTTTT-SS-SS CS
            zf-CCCH  3 telCrffartGtCkyGdrCkFaHg 26
                       +  C  f++ G+C++ ++C+F+H+
  TRIDC2AG017880.13 62 RGVCYAFQK-GECSRVASCRFSHD 84
                       567******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
QRNANTGWGS KEDDPKWEHD RHRGPQNKGE SRGVCYAFQK GECSRGDTCR FSHDEQVAVQ  60
GRGVCYAFQK GECSRVASCR FSHDEQQRNA NTDRGSREDS NARRQHDHDP PKSHKNFPDR  120
TKEEARSGDR DGQSSRSELY RDRDSRTRYG DRDTKDRDRN MQEKSPERSR GDRQRGDDRG  180
REDRSDTKDR DRNGHEKSPE RSRGDRQRGD DRGREDRSDV KDRDRNGYEK SPERPRGDRQ  240
RGDDRRREDR SESKRSRHDR DSGVRYERRG DEEEERYRKS RR