PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG017880.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 285aa    MW: 33881 Da    PI: 9.8554
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG017880.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.32.6e-083858526
                       --SGGGGTS--TTTTT-SS-SS CS
            zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                        C  f++ G+C++Gd+C+F+H+
  TRIDC2AG017880.12 38 VCYAFQK-GECSRGDTCRFSHD 58
                       699****.*************7 PP
2zf-CCCH21.25.3e-076688326
                       S---SGGGGTS--TTTTT-SS-SS CS
            zf-CCCH  3 telCrffartGtCkyGdrCkFaHg 26
                       +  C  f++ G+C++ ++C+F+H+
  TRIDC2AG017880.12 66 RGVCYAFQK-GECSRVASCRFSHD 88
                       567******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MVIFQRNANT GWGSKEDDPK WEHDRHRGPQ NKGESRGVCY AFQKGECSRG DTCRFSHDEQ  60
VAVQGRGVCY AFQKGECSRV ASCRFSHDEQ RNANTDRGSR EDSNARRQHD HDPPKSHKNF  120
PDRTKEEARS GDRDGQSSRS ELYRDRDSRT RYGDRDTKDR DRNMQEKSPE RSRGDRQRGD  180
DRGREDRSDT KDRDRNGHEK SPERSRGDRQ RGDDRGREDR SDVKDRDRNG YEKSPERPRG  240
DRQRGDDRRR EDRSESKRSR HDRDSGVRYE RRGDEEEERY RKSRR