PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG015380.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HB-other | ||||||||
Protein Properties | Length: 250aa MW: 28457.5 Da PI: 10.9759 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 46.6 | 5.9e-15 | 54 | 105 | 6 | 57 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR ke++ TRIDC2AG015380.10 54 KKSPLQIQMLESFYSEVQYPKPEDVTEYAASVGLTYNQVRIWFKERRRKERR 105 66899*********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
ALLRPPRPRR AHPAGHSLPP PSPTSPSRRL QLSLHRCLMM AKGFLAKSDN AGTKKSPLQI 60 QMLESFYSEV QYPKPEDVTE YAASVGLTYN QVRIWFKERR RKERRHMEAA EVHMETQASA 120 RSNWPRCSSS RSSNSSQSPM QDTTGHQSYQ DQSVLKKRKI MSPTAQRSTL PFENNDPVRK 180 HGKGKGLMTV WHAMYSQTAE IQDCSSFIDE SGCLRSLRPF EDCGGKLAQR QTLPRKKVNK 240 KSRPPPSKRK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 156 | 185 | KKRKIMSPTAQRSTLPFENNDPVRKHGKGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12750.1 | 3e-09 | HB-other family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG015380.10 |