PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG014040.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 299aa    MW: 31694.7 Da    PI: 7.118
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG014040.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.56.8e-1859107355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+++++g
  TRIDC2AG014040.1  59 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 107
                       56******.**********965...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MSSRSSSGGG GASQMMAFSE HSLPKPIAGH PQPQPSPPSS PSERPAARGR RRAQEPGRFL  60
GVRRRPWGRY AAEIRDPTTK ERHWLGTFDT AQEAALAYDR AALSMKGAQA RTNFVYAHAA  120
YNNYPPFLAP FHAQHQPAAY AASSAMPYGG QQQHAGAGPP HIGSSYHHGH GYHQQGPGEC  180
SMPVPSAADH GASGPMDVRG SSGHDFLFPS ADDNSGYLSS VVPESCLRPR GGDLQDARRY  240
SVSDADAYGL GLREDVDDLA TMVAGFWGGA DAPYGGGHDM VASSQGSDNG YSPFSFLSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.11e-33ERF family protein