PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG013990.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 349aa MW: 36872.6 Da PI: 6.5138

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG013990.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.4	2.8e-32	180	235	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 kpr++W+peLH+rF++a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ TRIDC2AG013990.3 180 KPRRCWAPELHRRFLQALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 235 79****************************************************97 PP
2	Myb_DNA-binding	39.9	9.7e-13	182	233	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W +e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ TRIDC2AG013990.3 182 RRCWAPELHRRFLQALQQLGGShvaTPKQIRELMKvDGLTNDEVKSHLQKYR 233 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MKSQMGGAAS EETVSDHGGP VLEEFIPLKP SLSLSSSDDE TSTHAAVAPV SNAKAETPPP 60 TPETKKAMPD WLQCAQLSSA WSEPQQSSSL QKVLPCRPVA LNATRTGGAF HPFEKEKQPE 120 PELPASSTTA PASSALVGDS GDKATSDTEV HDKDSKDATE KDTEKDKDKE GQSQPPNNRK 180 PRRCWAPELH RRFLQALQQL GGSHVATPKQ IRELMKVDGL TNDEVKSHLQ KYRLHTSRRP 240 SSTAQSGGAP ATQPTPQFFV VGSCIWVPQQ EYAAAAAAAA AAAEATNVAP GSANQVYAPT 300 ATLPSGSKPH LEKQSSRQSE GPRSGVNSDS DNPTMSLSSS SQATSAGHP

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MKSQMGGAAS EETVSDHGGP VLEEFIPLKP SLSLSSSDDE TSTHAAVAPV SNAKAETPPP  60
TPETKKAMPD WLQCAQLSSA WSEPQQSSSL QKVLPCRPVA LNATRTGGAF HPFEKEKQPE  120
PELPASSTTA PASSALVGDS GDKATSDTEV HDKDSKDATE KDTEKDKDKE GQSQPPNNRK  180
PRRCWAPELH RRFLQALQQL GGSHVATPKQ IRELMKVDGL TNDEVKSHLQ KYRLHTSRRP  240
SSTAQSGGAP ATQPTPQFFV VGSCIWVPQQ EYAAAAAAAA AAAEATNVAP GSANQVYAPT  300
ATLPSGSKPH LEKQSSRQSE GPRSGVNSDS DNPTMSLSSS SQATSAGHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	1e-45	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG013990.3