PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG012580.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 806aa MW: 89275.1 Da PI: 6.1594

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG012580.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.8	4.8e-19	219	318	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+kvl+ sd+++ grlvlpk +ae++ ++++e++ lt++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ + TRIDC2AG012580.1 219 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGRPLTIQDAKGKEWHFQFRFwpNNNSRMYVLE-GVTPCIQSLQLQAGDTVTFSRIE-PG 309 99************************555567778***********99899999999.*******************887.77 PP E..EEEEE- CS B3 90 felvvkvfr 98 ++lv+++++ TRIDC2AG012580.1 310 GKLVMGFRK 318 777877776 PP

Sequence ? help Back to Top
Protein Sequence Length: 806 aa Download sequence
MLDSRSDDIA IITKSNHPFM VKNLEIGQSS NILRQKEIEN GARQIKWEQP TLSIGDMGRM 60 PFLIRPQSAL ESPQSQCTRR DDNRDPTADS TTSESISEAG LSMSLGIANN GNKMEATSTM 120 ERPMVSPTTP FSEGRELATT LSPFQHAQRA RHFLTRPPRV AEGAAFDPMR DGFPHLRVAR 180 PPAEGRGRNQ LLPRYWPRIT DQELQQISGD SNSTIVPLFE KVLSASDAGR IGRLVLPKAC 240 AEAYFPPISQ PEGRPLTIQD AKGKEWHFQF RFWPNNNSRM YVLEGVTPCI QSLQLQAGDT 300 VTFSRIEPGG KLVMGFRKAT NTVSLPDSQI SAIATGSLLG DSFFSNTNEN LSIVSGYSGF 360 LQSMKGAADL QPSSLFDHHA NSADGDVSWL KADRFGGRPD EGSFQFLHKR SRSIGSKSRR 420 LLMDNEEALE LKLSWEEAQE LLRPAPSAKP TVVMIEDYEF EEYDEPPVFA KRSIFTSRST 480 GEQDQWIQCD DCSKWRRLPL NVIIASKWRC ADNTWDPKSC SCSAPEELAH KELQSILQQY 540 EEIRRRKSNY FLKQSIPEMD ASSLDALATA AVFGEVGNQG AASVATTTKH PRHRPGCTCI 600 VCIQPPSGKG PKHNPACTCN VCMTVRRRFK TLMMRKKQRQ SEREEAEASK RIAWVGRDEP 660 EGSNLSRSPQ TVDTARDCDV IMFDKADANK GHIDLNFHPA SREEEQQHGG QPRVSMVSLL 720 EVANRPLESY MKQNGLVSLA AEQGSSSGTA TVPSQPAPME SEERPSDEGR AVAVEQEREP 780 VDNMAVDEAA CENQGNAASA SDIAAT

Sequence ? help Back to Top

Protein Sequence Length: 806 aa Download sequence

MLDSRSDDIA IITKSNHPFM VKNLEIGQSS NILRQKEIEN GARQIKWEQP TLSIGDMGRM  60
PFLIRPQSAL ESPQSQCTRR DDNRDPTADS TTSESISEAG LSMSLGIANN GNKMEATSTM  120
ERPMVSPTTP FSEGRELATT LSPFQHAQRA RHFLTRPPRV AEGAAFDPMR DGFPHLRVAR  180
PPAEGRGRNQ LLPRYWPRIT DQELQQISGD SNSTIVPLFE KVLSASDAGR IGRLVLPKAC  240
AEAYFPPISQ PEGRPLTIQD AKGKEWHFQF RFWPNNNSRM YVLEGVTPCI QSLQLQAGDT  300
VTFSRIEPGG KLVMGFRKAT NTVSLPDSQI SAIATGSLLG DSFFSNTNEN LSIVSGYSGF  360
LQSMKGAADL QPSSLFDHHA NSADGDVSWL KADRFGGRPD EGSFQFLHKR SRSIGSKSRR  420
LLMDNEEALE LKLSWEEAQE LLRPAPSAKP TVVMIEDYEF EEYDEPPVFA KRSIFTSRST  480
GEQDQWIQCD DCSKWRRLPL NVIIASKWRC ADNTWDPKSC SCSAPEELAH KELQSILQQY  540
EEIRRRKSNY FLKQSIPEMD ASSLDALATA AVFGEVGNQG AASVATTTKH PRHRPGCTCI  600
VCIQPPSGKG PKHNPACTCN VCMTVRRRFK TLMMRKKQRQ SEREEAEASK RIAWVGRDEP  660
EGSNLSRSPQ TVDTARDCDV IMFDKADANK GHIDLNFHPA SREEEQQHGG QPRVSMVSLL  720
EVANRPLESY MKQNGLVSLA AEQGSSSGTA TVPSQPAPME SEERPSDEGR AVAVEQEREP  780
VDNMAVDEAA CENQGNAASA SDIAAT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	626	637	RRRFKTLMMRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-171	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG012580.1