PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG008830.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 237aa MW: 26538.4 Da PI: 9.5502 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.9 | 5.6e-09 | 185 | 233 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqk 46 r++WT+ + l+d+v ++G+g+Wk I + + R+ + k+++++ TRIDC2AG008830.1 185 RKKWTEIQERTLIDGVDKYGKGNWKDIKIAYPdvfQDRSTVDMKDKFRN 233 789*******************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
LDTWANADQD TRKKLRRLVG ESTAREILGK LGQDPSKAPQ VDEAANAPST SGANEGDRAQ 60 QDDEAHLGRG KGEASLAQED CARHQQEPVE RTTDARIPEK PVTSAATKGK EQATSSHVTG 120 QAAPDHNKSH PVTGPKPSLM ERKPSAIVYQ WDSGDSDSER PPHQRRLPNY ERRMRPPPAV 180 PYKTRKKWTE IQERTLIDGV DKYGKGNWKD IKIAYPDVFQ DRSTVDMKDK FRNMGRH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15720.1 | 1e-10 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG008830.1 |