PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG007540.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 348aa MW: 37838.4 Da PI: 8.3925

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG007540.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.6	3.9e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l++ ++G+g +W + +++ g++R++k+c++rw++yl TRIDC2AG007540.2 14 KGPWSPEEDAKLKEFMDKHGTGgNWIALPQKAGLRRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	34.9	3.6e-11	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+ Ed + + G++ W+ Ia+ ++ gRt++++k++w++ TRIDC2AG007540.2 69 GEFTEHEDRVICSMYASIGSR-WSIIASQLP-GRTDNDIKNYWNT 111 78*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MGRAPCCDKN NVKKGPWSPE EDAKLKEFMD KHGTGGNWIA LPQKAGLRRC GKSCRLRWLN 60 YLRPNIKHGE FTEHEDRVIC SMYASIGSRW SIIASQLPGR TDNDIKNYWN TKLKKKLMGS 120 TTMAGAGPPP RAPRQNHHQH RPVLLPYSSS PHSNYSNFFP GAGALLQQSA EPLTLQPQDH 180 YMLGSSGSLN PMGNSNGASA VQLQLLHATT AHRQLQVKEE CGSGGAMIAF GCGDQQSCSS 240 SDGTQYGGGQ YVHGGRHHGK EMSFENNNGY SAYGVYGNGA GAVEQEHKLS FQLQHQQEQQ 300 QAQLDYSYEE IKQLLMTAAA SGADGLIHDS ELIGAHAAAA AAGKLTMM

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MGRAPCCDKN NVKKGPWSPE EDAKLKEFMD KHGTGGNWIA LPQKAGLRRC GKSCRLRWLN  60
YLRPNIKHGE FTEHEDRVIC SMYASIGSRW SIIASQLPGR TDNDIKNYWN TKLKKKLMGS  120
TTMAGAGPPP RAPRQNHHQH RPVLLPYSSS PHSNYSNFFP GAGALLQQSA EPLTLQPQDH  180
YMLGSSGSLN PMGNSNGASA VQLQLLHATT AHRQLQVKEE CGSGGAMIAF GCGDQQSCSS  240
SDGTQYGGGQ YVHGGRHHGK EMSFENNNGY SAYGVYGNGA GAVEQEHKLS FQLQHQQEQQ  300
QAQLDYSYEE IKQLLMTAAA SGADGLIHDS ELIGAHAAAA AAGKLTMM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	2e-76	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG007540.2