PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2AG001130.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 201aa MW: 22132.1 Da PI: 9.3335 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 105.5 | 2.9e-33 | 108 | 166 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ vv++tYeg+H+h+ TRIDC2AG001130.2 108 LDDGYRWRKYGQKAVKNNNFPRSYYRCTHQGCNVKKQVQRLSRDEGVVVTTYEGTHTHP 166 59********************************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 201 aa Download sequence |
PILFGTQPSS STSNSYHFMA GASSHDHLHH HGQAAGNNTG GGGGLGQGLF SGSKQEDPSE 60 SKDGGDDRAG SSSQGGGEAD VVVGKKKGEK RERRPRFAFQ TRSQVDILDD GYRWRKYGQK 120 AVKNNNFPRS YYRCTHQGCN VKKQVQRLSR DEGVVVTTYE GTHTHPIEKS NDNFEHILTQ 180 MQVYSGINNV SQTFGNQHMF Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G13080.1 | 2e-56 | WRKY family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2AG001130.2 |