PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG070610.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 84aa MW: 9403.55 Da PI: 9.0927 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.8 | 2.5e-08 | 5 | 49 | 4 | 45 |
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT+ +l+ +a + + + +W+ Iar +g g+++ +++ ++ TRIDC1BG070610.1 5 WTPKQNKLFEQALAVHDRDtpdRWHNIARAVGGGKSADDVRRYYE 49 *****************99************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 84 aa Download sequence |
MSAGWTPKQN KLFEQALAVH DRDTPDRWHN IARAVGGGKS ADDVRRYYEL LVHDIARIEA 60 GKVPFPAYRP PCPGTGHNAS YEKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 1e-28 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG070610.1 |