PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG070570.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 76aa MW: 8454.31 Da PI: 8.5055 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.4 | 6.7e-08 | 14 | 60 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 +WT+ +++ +a + + + +W+ +ar+mg +++ +++ ++ TRIDC1BG070570.1 14 AWTQRQNKQFECALAVYDLDtphRWHDVARYMGGAKSADEVRRHFER 60 7*****************99*************999********965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 76 aa Download sequence |
MSSSAGSKGS AATAWTQRQN KQFECALAVY DLDTPHRWHD VARYMGGAKS ADEVRRHFER 60 LVHDVAQIES SGRYAG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 7e-20 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG070570.1 |