PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG069950.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 339aa    MW: 36172.1 Da    PI: 9.7374
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG069950.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH44.91.9e-14264289126
                       --S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                       yktelC+ + +tG C yGd+C+FaHg
  TRIDC1BG069950.1 264 YKTELCNKWEETGACLYGDQCQFAHG 289
                       9************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
CSSPSPGGSP FTPSPRLPPR AAPFTPSPRP SPRATPFTPS TGTSSGSTLF TPSPRTHPSG  60
TPWSSSTSGS RVDDAAATEH RLHLARLALQ CQDATNRYEL CLSHLADAAR EAAALRLENS  120
ELRIINNDLA GRFAMLGGNQ ASAVALAGQL RGLQLGQMPV QAVASPPVLP MPMAGPASPA  180
EKHAVMPKSI SIRSTGYLKM ARRGKHRATK PMDVASQQRV FVGVDVGGGK AEEHQGGSAG  240
GDRRGQVVKS ASGLEFEAYS QGMYKTELCN KWEETGACLY GDQCQFAHGI AELRPIIRHP  300
RYKTQVCRMV IGGGLCPYGY RCHFRHSITP ADYIPLLHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.11e-48C3H family protein